Update .gitlab-ci.yml

.gitlab-ci.yml

@@ -45,7 +45,12 @@ astrocyte_check:
   script:
   - astrocyte_cli check "$CI_PROJECT_DIR"
   
-
+nextflow_test:
+  stage: test
+  script:
+  - module load nextflow/20.01.0 
+  - module load singularity/3.5.3 
+  - nextflow  -C $CI_PROJECT_DIR/workflow/configs/biohpc.config  run main.nf -with-trace -with-timeline -resume --verbose
 
 # This runs the workflow with test data and does a simple
 # check for the expected output file