Commit 307235d2 authored by Devin OKelly's avatar Devin OKelly
Browse files

Update .gitlab-ci.yml

parent 3de80f06
......@@ -45,7 +45,12 @@ astrocyte_check:
script:
- astrocyte_cli check "$CI_PROJECT_DIR"
nextflow_test:
stage: test
script:
- module load nextflow/20.01.0
- module load singularity/3.5.3
- nextflow -C $CI_PROJECT_DIR/workflow/configs/biohpc.config run main.nf -with-trace -with-timeline -resume --verbose
# This runs the workflow with test data and does a simple
# check for the expected output file
......
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