biohpc_singularity_gitlab.config 536 Bytes
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docker {
  enabled = true
  runOptions = '--bind /vagrant:/vagrant'
  cacheDir = "$baseDir/images/singularity"
}


process {
    executor = 'local'
    withName:uppercase {
        container = 'git.biohpc.swmed.edu:5050/s190450/astrocyte_example_wordcount/ubuntu:latest'
    }
    withName:tolines {
        container = 'git.biohpc.swmed.edu:5050/s190450/astrocyte_example_wordcount/ubuntu:latest'
    }
    withName:wordcounts {
        container = 'git.biohpc.swmed.edu:5050/s190450/astrocyte_example_wordcount/ubuntu:latest'
    }
}