Commit 794aedb6 authored by David Trudgian's avatar David Trudgian

Need test data to download to run test

parent 8eba4bb8
Pipeline #2934 failed with stages
in 37 seconds
......@@ -17,6 +17,9 @@ astrocyte_check:
astrocyte_test:
stage: test
script:
- cd "$CI_PROJECT_DIR/test_data"
- sh fetch_test_data.sh
- cd "$TMP_DIR"
- astrocyte_cli test "$CI_PROJECT_DIR"
- test -s "$CI_PROJECT_DIR/workflow/output/G1E_ER4_CTCT_chr9.fastq.sam.gz.bam"
- test -s "$CI_PROJECT_DIR/workflow/output/G1E_ER4_CTCT_chr9.fastq.sam.gz.bam_bwa_nomodel_peaks.bed"
......
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