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BioHPC
astrocyte_example_chipseq
Commits
76b23e10
Commit
76b23e10
authored
Mar 04, 2016
by
David Trudgian
Browse files
Correct publishDir typo in README
parent
94fd351b
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README.md
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76b23e10
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@@ -171,7 +171,7 @@ accepted as workflow parameters**. Astrocyte will allow users to select input
files, and pass the parameter values to your workflow.
Output files for the user should be published to
`$baseDir/output`
using the nextflow
directive
`publishDir "$baseDir/output, mode: 'copy'
'"
`
in a process block.
directive
`publishDir "$baseDir/output
"
, mode: 'copy'`
in a process block.
You can create a directory structure inside
`$baseDir/output`
if required to
organize the output files. Note that we use the 'copy' mode so that Nextflow's
work directories can be cleaned up by Astrocyte. By default Nextflow will link
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