Commit 76b23e10 authored by David Trudgian's avatar David Trudgian
Browse files

Correct publishDir typo in README

parent 94fd351b
......@@ -171,7 +171,7 @@ accepted as workflow parameters**. Astrocyte will allow users to select input
files, and pass the parameter values to your workflow.
Output files for the user should be published to `$baseDir/output` using the nextflow
directive `publishDir "$baseDir/output, mode: 'copy''"` in a process block.
directive `publishDir "$baseDir/output", mode: 'copy'` in a process block.
You can create a directory structure inside `$baseDir/output` if required to
organize the output files. Note that we use the 'copy' mode so that Nextflow's
work directories can be cleaned up by Astrocyte. By default Nextflow will link
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