Skip to content
GitLab
Projects
Groups
Snippets
Help
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in / Register
Toggle navigation
A
astrocyte_example_chipseq
Project overview
Project overview
Details
Activity
Releases
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Locked Files
Issues
0
Issues
0
List
Boards
Labels
Service Desk
Milestones
Iterations
Merge Requests
0
Merge Requests
0
Requirements
Requirements
List
CI / CD
CI / CD
Pipelines
Jobs
Schedules
Test Cases
Security & Compliance
Security & Compliance
Dependency List
License Compliance
Operations
Operations
Incidents
Environments
Analytics
Analytics
CI / CD
Code Review
Insights
Issue
Repository
Value Stream
Wiki
Wiki
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Create a new issue
Jobs
Commits
Issue Boards
Open sidebar
BioHPC
astrocyte_example_chipseq
Commits
396c0c8d
Commit
396c0c8d
authored
May 13, 2016
by
David Trudgian
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
Pad glob with space so works for single file
parent
e054b010
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
with
1 addition
and
1 deletion
+1
-1
workflow/main.nf
workflow/main.nf
+1
-1
No files found.
workflow/main.nf
View file @
396c0c8d
...
...
@@ -19,7 +19,7 @@ params.index = "/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg19/Sequence/
// First, get the list of fastqs. When multiple files are selected on the web
// interface they will be passed as a comma-separated list. Therefore we use the
// { pattern1,pattern2 } glob syntax to pick all them up.
fastqs = Channel.fromPath( "{" + params.fastq+ ",}" )
fastqs = Channel.fromPath( "{" + params.fastq+ ",
}" )
// Now find the path to the BWA index directory
index_path = file(params.index).parent
// And get the name of the actual index inside that directory
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment