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BioHPC
astrocyte_example_chipseq
Commits
031bc50d
Commit
031bc50d
authored
Jun 10, 2016
by
David Trudgian
Browse files
Add additional genome options.
parent
82caaca4
Changes
1
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Inline
Side-by-side
astrocyte_pkg.yml
View file @
031bc50d
...
...
@@ -90,8 +90,11 @@ workflow_parameters:
-
id
:
index
type
:
select
choices
:
-
[
'
/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg38/Sequence/BWAIndex/genome.fa'
,
'
UCSC
hg38'
]
-
[
'
/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg19/Sequence/BWAIndex/genome.fa'
,
'
UCSC
hg19'
]
-
[
'
/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg18/Sequence/BWAIndex/genome.fa'
,
'
UCSC
hg18'
]
-
[
'
/project/apps_database/iGenomes/Mus_musculus/UCSC/mm10/Sequence/BWAIndex/genome.fa'
,
'
UCSC
mm10'
]
-
[
'
/project/apps_database/iGenomes/Mus_musculus/UCSC/mm9/Sequence/BWAIndex/genome.fa'
,
'
UCSC
mm9'
]
required
:
true
description
:
|
Reference genome for BWA alignment
...
...
@@ -115,4 +118,4 @@ vizapp_cran_packages:
# # List of any Bioconductor packages, not provided by the modules, that must be made
# available to the vizapp
vizapp_bioc_packages
:
-
chipseq
-
chipseq
\ No newline at end of file
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