From faad8b58dd2da3c20b102042702b6c327acfee99 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sat, 11 Aug 2018 20:16:35 -0500
Subject: [PATCH] Add in experiment qc for paired-end data.

---
 workflow/tests/test_experiment_qc.py | 7 +++++--
 1 file changed, 5 insertions(+), 2 deletions(-)

diff --git a/workflow/tests/test_experiment_qc.py b/workflow/tests/test_experiment_qc.py
index 875aea6..308ebe2 100644
--- a/workflow/tests/test_experiment_qc.py
+++ b/workflow/tests/test_experiment_qc.py
@@ -40,5 +40,8 @@ def test_experiment_qc_singleend():
 
 @pytest.mark.integration
 def test_experiment_qc_pairedend():
-    # Do the same thing for paired end data
-    pass
+    assert os.path.exists(os.path.join(test_output_path, 'sample_mbs.npz'))
+    assert os.path.exists(os.path.join(test_output_path, 'heatmap_SpearmanCorr.png'))
+    assert os.path.exists(os.path.join(test_output_path, 'coverage.png'))
+    assert os.path.exists(os.path.join(test_output_path, 'ENCLB568IYX_fingerprint.png'))
+    assert os.path.exists(os.path.join(test_output_path, 'ENCLB637LZP_fingerprint.png'))
-- 
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