From d9919554d5d791ecbf8f5ba368d27d1eb8ed0df4 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sat, 9 Mar 2019 21:31:36 -0600
Subject: [PATCH] Only run certain tests on branches vs master.
---
.gitlab-ci.yml | 16 ++++++++++++++++
1 file changed, 16 insertions(+)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 69c2ece..6d2c02b 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -17,6 +17,10 @@ user_configuration:
single_end_mouse:
stage: single
+ only:
+ - master
+ except:
+ - branches
script:
- nextflow run workflow/main.nf -resume
- pytest -m singleend
@@ -25,6 +29,10 @@ single_end_mouse:
paired_end_human:
stage: single
+ only:
+ - branches
+ except:
+ - master
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR729LGA_PE.txt" --genome 'GRCh38' --pairedEnd true -resume
- pytest -m pairedend
@@ -33,6 +41,10 @@ paired_end_human:
single_end_diff:
stage: multiple
+ only:
+ - branches
+ except:
+ - master
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_SE.txt" --genome 'GRCm38' -resume
- pytest -m singlediff
@@ -40,6 +52,10 @@ single_end_diff:
expire_in: 2 days
paired_end_diff:
+ only:
+ - master
+ except:
+ - branches
stage: multiple
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_PE.txt" --genome 'GRCh38' --pairedEnd true -resume
--
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