diff --git a/workflow/main.nf b/workflow/main.nf index ea6f756f6d457c36fbc8644cfeb209d6f4192725..5a49790bd889d2e9d650ab4871aaa386d8dfeea6 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -483,7 +483,7 @@ process plotProfile { input: - file ("*.pooled.fc_signal.bw") from bigwigs.collect() + file bigWigList from bigwigs.collect() output: diff --git a/workflow/scripts/plot_profile.sh b/workflow/scripts/plot_profile.sh index 277f99335e35595876ea74f4bdfa1dfa04c558e6..34bf24e9026f442bfc91d935d9a35470a4d6bddc 100755 --- a/workflow/scripts/plot_profile.sh +++ b/workflow/scripts/plot_profile.sh @@ -84,7 +84,7 @@ run_main() { usage fi - bws=$(ls *.bw) + bws=$(ls *.pooled.fc_signal.bw) check_tools || exit 1