From c64e9f39337e7396172b45c719ba171eab6fddf5 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Wed, 18 Oct 2017 13:40:51 -0500
Subject: [PATCH] Fix varaible name.
---
workflow/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index 664ed7c..0e07dd5 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -167,7 +167,7 @@ process filterReads {
dedupDesign = dedupReads
.map{ sampleId, bam, bai, biosample, factor, treatment, replicate, controlId ->
"$sampleId\t$bam\t$bai\t$biosample\t$factor\t$treatment\t$replicate\t$controlId\n"}
- .collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrolId\n", storeDir:"$baseDir/output/design")
+ .collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrol_id\n", storeDir:"$baseDir/output/design")
// Quality Metrics using deeptools
process experimentQC {
--
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