From c412f90fefe3ee58e8c94a9a2e5d039b203cf25e Mon Sep 17 00:00:00 2001
From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu>
Date: Thu, 25 Jul 2019 16:18:58 -0500
Subject: [PATCH] new run
---
workflow/scripts/pool_and_psuedoreplicate.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/scripts/pool_and_psuedoreplicate.py b/workflow/scripts/pool_and_psuedoreplicate.py
index 1b0c657..887d0d3 100644
--- a/workflow/scripts/pool_and_psuedoreplicate.py
+++ b/workflow/scripts/pool_and_psuedoreplicate.py
@@ -233,7 +233,7 @@ def generate_design(paired, cutoff_ratio, design_df, cwd, no_reps, no_unique_con
self_pseudoreplicates_dict = {}
for rep, tag_file in zip(design_df['replicate'], design_df['tag_align']):
replicate_prefix = experiment_id + '_' + str(rep)
- self_pseudoreplicates_dict = self_psuedoreplication(tag_file, replicate_prefix, paired)
+ self_pseudoreplicates_dict[rep] = self_psuedoreplication(tag_file, replicate_prefix, paired)
# Update design to include new self pseudo replicates
--
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