From b801983fe01c9cbea71add27940555be42749bd5 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sun, 22 Oct 2017 23:18:05 -0500
Subject: [PATCH] update config to not have local step.
---
workflow/conf/biohpc.config | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config
index de84d90..2bea1b7 100644
--- a/workflow/conf/biohpc.config
+++ b/workflow/conf/biohpc.config
@@ -21,7 +21,7 @@ process {
}
$experimentQC {
module = ['python/3.6.1-2-anaconda', 'deeptools/2.5.0.1']
- executor = 'local'
+ cpus = 32
}
$convertReads {
module = ['python/3.6.1-2-anaconda', 'samtools/1.4.1', 'bedtools/2.26.0']
--
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