diff --git a/workflow/main.nf b/workflow/main.nf index e8ad27511fdafdecdca3fb51eeb7ca9f667887af..765ba3b1d1cd5b1d37d8dc339464d694c46ab8e2 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -654,7 +654,7 @@ process multiqcReport { """ echo $workflow.nextflow.version > version_nextflow.txt - singularity exec project/shared/bicf_workflow_ref/singularity_images/bicf-multiqc-2.0.0.img multiqc --version > version_multiqc.txt + singularity exec /project/shared/bicf_workflow_ref/singularity_images/bicf-multiqc-2.0.0.img multiqc --version > version_multiqc.txt python --version &> version_python.txt python3 $baseDir/scripts/generate_references.py -r $references -o software_references python3 $baseDir/scripts/generate_versions.py -o software_versions