From af60bbd53f6014e917aaf6d3dc73517b0cb89a41 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Tue, 12 Mar 2019 08:40:16 -0500
Subject: [PATCH] Fix config.
---
workflow/conf/biohpc.config | 4 ----
workflow/main.nf | 1 +
2 files changed, 1 insertion(+), 4 deletions(-)
diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config
index 739fce6..6fa3cda 100644
--- a/workflow/conf/biohpc.config
+++ b/workflow/conf/biohpc.config
@@ -60,10 +60,6 @@ process {
module = ['python/3.6.1-2-anaconda', 'meme/4.11.1-gcc-openmpi', 'bedtools/2.26.0']
cpus = 32
}
- withName: softwareVersions {
- module = ['python/3.6.1-2-anaconda']
- executor = 'local'
- }
withName: softwareReport {
module = ['python/3.6.1-2-anaconda']
executor = 'local'
diff --git a/workflow/main.nf b/workflow/main.nf
index 420a0c7..8630929 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -498,6 +498,7 @@ process softwareReport {
output:
+
file('*_mqc.yaml') into softwareVersions
file('*_mqc.txt') into softwareReferences
--
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