diff --git a/workflow/scripts/convert_reads.py b/workflow/scripts/convert_reads.py index 8c090aee9774f9925118b8a062a799e73dfc8c5a..8d896b7c4582edcfb7f8de349097004d039e04b0 100644 --- a/workflow/scripts/convert_reads.py +++ b/workflow/scripts/convert_reads.py @@ -30,7 +30,7 @@ def get_args(): formatter_class=argparse.RawDescriptionHelpFormatter) parser.add_argument('-b', '--bam', - help="The bam file to run filtering and qc on.", + help="The bam file to convert.", required=True) parser.add_argument('-p', '--paired',