From 9ca5c5fff9e1eae58b15f822aaea9dae655a4331 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sat, 18 Nov 2017 11:37:16 -0600
Subject: [PATCH] Removed hard coded file path when testing.
---
workflow/scripts/overlap_peaks.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/scripts/overlap_peaks.py b/workflow/scripts/overlap_peaks.py
index 7a27e94..379f884 100644
--- a/workflow/scripts/overlap_peaks.py
+++ b/workflow/scripts/overlap_peaks.py
@@ -179,7 +179,7 @@ def main():
logger.addHandler(handler)
# Read files as dataframes
- design_peaks_df = pd.read_csv('../design/design_peak.tsv', sep='\t')
+ design_peaks_df = pd.read_csv(design, sep='\t')
design_files_df = pd.read_csv(files, sep='\t')
# Make a design file for
--
GitLab