diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config index 73bffa1bf48c922a9a188af2e108ea5dc345d9ed..2c0f1c31a9c46b5f9f45699f3c1eb506d6c62e10 100644 --- a/workflow/conf/biohpc.config +++ b/workflow/conf/biohpc.config @@ -14,19 +14,19 @@ process { } withName: alignReads{ module = ['python/3.6.1-2-anaconda', 'bwa/intel/0.7.12', 'samtools/1.6'] - cpus = 32 + queue = '128GB,256GB,256GBv1' } withName: filterReads{ module = ['python/3.6.1-2-anaconda', 'samtools/1.6', 'sambamba/0.6.6', 'bedtools/2.26.0'] - cpus = 32 + queue = '128GB,256GB,256GBv1' } withName: experimentQC { module = ['python/3.6.1-2-anaconda', 'deeptools/2.5.0.1'] - cpus = 32 + queue = '128GB,256GB,256GBv1' } withName: convertReads { module = ['python/3.6.1-2-anaconda', 'samtools/1.6', 'bedtools/2.26.0'] - cpus = 32 + queue = '128GB,256GB,256GBv1' } withName: crossReads { module = ['python/3.6.1-2-anaconda', 'phantompeakqualtools/1.2'] @@ -42,7 +42,7 @@ process { } withName: callPeaksMACS { module = ['python/3.6.1-2-anaconda', 'macs/2.1.0-20151222', 'phantompeakqualtools/1.2', 'UCSC_userApps/v317', 'bedtools/2.26.0'] - cpus = 32 + queue = '128GB,256GB,256GBv1' } withName: consensusPeaks { module = ['python/3.6.1-2-anaconda', 'bedtools/2.26.0']