diff --git a/workflow/main.nf b/workflow/main.nf index e4853866a9890a900bd761be3090232a114587a1..664ed7cef90611bf350978d7c69c52310e78178f 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -166,7 +166,7 @@ process filterReads { // Define channel collecting new design file dedupDesign = dedupReads .map{ sampleId, bam, bai, biosample, factor, treatment, replicate, controlId -> - "$sample_id\t$bam\t$bai\t$biosample\t$factor\t$treatment\t$replicate\t$controlId\n"} + "$sampleId\t$bam\t$bai\t$biosample\t$factor\t$treatment\t$replicate\t$controlId\n"} .collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrolId\n", storeDir:"$baseDir/output/design") // Quality Metrics using deeptools