From 5f6dd1118fecdcefb7dec9a08ccff98c7f84ac48 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sat, 9 Mar 2019 21:22:09 -0600
Subject: [PATCH] Fix diff peaks output for single end.
---
workflow/tests/test_diff_peaks.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/tests/test_diff_peaks.py b/workflow/tests/test_diff_peaks.py
index 84c5179..b0a76aa 100644
--- a/workflow/tests/test_diff_peaks.py
+++ b/workflow/tests/test_diff_peaks.py
@@ -42,7 +42,7 @@ def test_diffbind_singleend_multiple_rep():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_vs_ENCSR272GNQ_diffbind.bed'))
diffbind_file = test_output_path + 'ENCSR238SGC_vs_ENCSR272GNQ_diffbind.csv'
assert os.path.exists(diffbind_file)
- assert utils.count_lines(diffbind_file) == 201039
+ assert utils.count_lines(diffbind_file) == 197471
@pytest.mark.paireddiff
--
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