From 2c56b9c7e0c8f0a3973e80de2b3ac0f44347c74d Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Tue, 14 May 2019 16:07:23 -0500
Subject: [PATCH] Add in python3 for motif serach.
---
workflow/main.nf | 1 +
1 file changed, 1 insertion(+)
diff --git a/workflow/main.nf b/workflow/main.nf
index 0bbb358..05db5dd 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -521,6 +521,7 @@ process motifSearch {
script:
"""
+ module load python/3.6.1-2-anaconda
module load meme/4.11.1-gcc-openmpi
module load bedtools/2.26.0
python3 $baseDir/scripts/motif_search.py -d $designMotifSearch -g $fasta -p $topPeakCount
--
GitLab