From 1ca8372ea95f52972eb38a6b13f30cc7b848bfb6 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Thu, 10 Jan 2019 07:04:37 -0600
Subject: [PATCH] Fix test peaks.
---
workflow/tests/test_annotate_peaks.py | 2 +-
workflow/tests/test_overlap_peaks.py | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/tests/test_annotate_peaks.py b/workflow/tests/test_annotate_peaks.py
index e698133..fa5c241 100644
--- a/workflow/tests/test_annotate_peaks.py
+++ b/workflow/tests/test_annotate_peaks.py
@@ -25,4 +25,4 @@ def test_annotate_peaks_pairedend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA.chipseeker_upsetplot.pdf'))
annotation_file = test_output_path + 'ENCSR729LGA.chipseeker_annotation.csv'
assert os.path.exists(annotation_file)
- assert utils.count_lines(annotation_file) == 25614
+ assert utils.count_lines(annotation_file) == 25391
diff --git a/workflow/tests/test_overlap_peaks.py b/workflow/tests/test_overlap_peaks.py
index 36ed3da..99d43b8 100644
--- a/workflow/tests/test_overlap_peaks.py
+++ b/workflow/tests/test_overlap_peaks.py
@@ -44,4 +44,4 @@ def test_overlap_peaks_singleend():
def test_overlap_peaks_pairedend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA.rejected.narrowPeak'))
peak_file = test_output_path + 'ENCSR729LGA.replicated.narrowPeak'
- assert utils.count_lines(peak_file) == 25878
+ assert utils.count_lines(peak_file) == 25655
--
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