From 05ae565ff2bef9c9de2665519c40e6c8e1323d99 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sat, 15 Feb 2020 23:10:01 -0600
Subject: [PATCH] Fix path for multiqc.

---
 workflow/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflow/main.nf b/workflow/main.nf
index 1edf9f5..e8ad275 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -658,6 +658,6 @@ process multiqcReport {
   python --version &> version_python.txt
   python3 $baseDir/scripts/generate_references.py -r $references -o software_references
   python3 $baseDir/scripts/generate_versions.py -o software_versions
-  singularity exec project/shared/bicf_workflow_ref/singularity_images/bicf-multiqc-2.0.0.img multiqc -c $multiqc .
+  singularity exec /project/shared/bicf_workflow_ref/singularity_images/bicf-multiqc-2.0.0.img multiqc -c $multiqc .
   """
 }
-- 
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