Commits · feature/autoenv · Strand Lab / Strand Lab Cellxgene Gateway

13 Apr, 2020 1 commit
- renaming environment.yml for nice conda autoenv behavior · 3cb52125
  Alok Saldanha authored Apr 13, 2020
  
  3cb52125
30 Mar, 2020 2 commits
- pin cellxgene version · 11bbc1ab
  Alok Saldanha authored Mar 30, 2020
  
  11bbc1ab
- misnamed key in process_exception.py · 186ccde2
  Alok Saldanha authored Mar 30, 2020
  
  186ccde2
23 Mar, 2020 1 commit
- updated import to reflect change in werkzeug api · 2b65c095
  Alok Saldanha authored Mar 23, 2020
  
  2b65c095
29 Jan, 2020 1 commit
- Merge pull request #17 from Novartis/annotations · bae42edd
  Alokito authored Jan 29, 2020
```
Support for Annotations
```
  bae42edd
18 Jan, 2020 3 commits
- #14 fixed links in folder listings · cc09ac3b
  Alok Saldanha authored Jan 18, 2020
  
  cc09ac3b
- #14 remove random characters from suffix · 96ac41d8
  Alok Saldanha authored Jan 18, 2020
  
  96ac41d8
- #14 fix bug in pruning code · 525a9691
  Alok Saldanha authored Jan 18, 2020
  
  525a9691
08 Jan, 2020 1 commit
- #14 properly use the external protocol in 302 redirects · 9f1d217e
  Alok Saldanha authored Jan 08, 2020
  
  9f1d217e
07 Jan, 2020 1 commit
- #14 redirect prior to returning loading screen · 6c611f55
  Alok Saldanha authored Jan 07, 2020
  
  6c611f55
05 Jan, 2020 1 commit
- #14 update links for opening and terminating datasets · 11efd3a9
  Alok Saldanha authored Jan 05, 2020
  
  11efd3a9
01 Jan, 2020 1 commit
- #14 added custom method to create data dirs · 201f8763
  Alok Saldanha authored Jan 01, 2020
  
  201f8763
28 Dec, 2019 2 commits
- #14 Added support for listing files with _ or - as separator · 736541c4
  Alok Saldanha authored Dec 28, 2019
  
  736541c4
- #14 enabled new annotations · c03098af
  Alok Saldanha authored Dec 21, 2019
```
Due to issue with opening annotation files with "-" in the name, this doesn't quite work.
```
  c03098af
21 Dec, 2019 1 commit
- #15 added intermediate index pages · f41db75a
  Alok Saldanha authored Dec 21, 2019
  
  f41db75a
28 Nov, 2019 1 commit
- #13 refresh page if more than five dots · 876263c0
  Alok Saldanha authored Nov 28, 2019
  
  876263c0
17 Nov, 2019 1 commit

#12 introduce GATEWAY_PORT, rename GATEWAY_HOST and GATEWAY_PROTOCOL to... · 9532375e

Alok Saldanha authored Nov 17, 2019

#12 introduce GATEWAY_PORT, rename GATEWAY_HOST and GATEWAY_PROTOCOL to EXTERNAL_HOST and EXTERNAL_PROTOCOL

Keep GATEWAY_HOST and GATEWAY_PROTOCOL for backwards compatibility (for now)

9532375e

29 Oct, 2019 3 commits
- #9 fix race condition by grabbing lock before adding cache entry · 91c96078
  Alok Saldanha authored Oct 29, 2019
  
  91c96078
- #9 properly terminate all child processes · 66f7a6b5
  Alok Saldanha authored Oct 29, 2019
  
  66f7a6b5
- #9 skip ports that are in use · 455e0cd0
  Alok Saldanha authored Oct 29, 2019
  
  455e0cd0
20 Oct, 2019 2 commits
- #8 added endpoint to return status json · c937f907
  Alok Saldanha authored Oct 20, 2019
  
  c937f907
- #7 added link to terminate loaded dataset · 464ee873
  Alok Saldanha authored Oct 20, 2019
  
  464ee873
23 Sep, 2019 2 commits
- #6 added info output of env · 2f2541d2
  Alok Saldanha authored Sep 23, 2019
```
improved logging config
```
  2f2541d2
- #6 add GATEWAY_ENABLE_UPLOAD environment variable · d3a290a3
  Alok Saldanha authored Sep 23, 2019
```
routes that modify disk are not added unless the env variable is set.
```
  d3a290a3
19 Sep, 2019 5 commits
- #5 fixed missing slash in path joining · 876538cd
  Alok Saldanha authored Sep 19, 2019
  
  876538cd
- #5 added failing test for path combination in render_entry · 6656de62
  Alok Saldanha authored Sep 19, 2019
  
  6656de62
- #5 added os.path.join to flask routes · 6cf953aa
  Alok Saldanha authored Sep 19, 2019
```
Also added a subdir check for security.
```
  6cf953aa
- GH-4 properly reference cache.prune · b5158dee
  Alok Saldanha authored Sep 19, 2019
```
also added logging
```
  b5158dee
- #4 added failing test for cache pruning · f6d10946
  Alok Saldanha authored Sep 19, 2019
  
  f6d10946
18 Sep, 2019 2 commits
- #3 added downgrade warning · c4828d8b
  Alok Saldanha authored Sep 18, 2019
  
  c4828d8b
- #3 fixed case of Readme.md in setup.py · 03e04d55
  Alok Saldanha authored Sep 18, 2019
  
  03e04d55
17 Sep, 2019 6 commits
- #2 replace print() with logging · 0b267725
  Alok Saldanha authored Sep 17, 2019
  
  0b267725
- #2 remove missing property · 5c41dbb1
  Alok Saldanha authored Sep 17, 2019
  
  5c41dbb1
- #2 blackened · 820314ad
  Alok Saldanha authored Sep 17, 2019
  
  820314ad
- #2 added link to relaunch server on process error page · f7f49b35
  Alok Saldanha authored Sep 17, 2019
  
  f7f49b35
- #2 added link to view status of currently loaded datasets · a6d80c19
  Alok Saldanha authored Sep 17, 2019
  
  a6d80c19
- #2 added a way to relaunch a cellxgene server · 2b259ab6
  Alok Saldanha authored Sep 17, 2019
  
  2b259ab6
16 Sep, 2019 3 commits
- added support for gateway ttl and manual pruning · a6c94567
  Alok Saldanha authored Sep 16, 2019
  
  a6c94567
- removed unnecessary selection · 90d5d8b5
  Alok Saldanha authored Sep 16, 2019
  
  90d5d8b5
- added section on reaching out to @alokito · af816960
  Alokito authored Sep 16, 2019
  
  af816960