Issues · Strand Lab / sc-TissueMapper_Pr

New issue

Issue Pd DEG not have all OE pops in comparisons!

#23 created 6 years ago by Gervaise Henry Nov 5, 2018
BUG
- Closed
closed 6 years ago
Issue Remove depreciated scripts

#22 created 6 years ago by Gervaise Henry
Enhancement
- Closed
closed 6 years ago
Issue Add Surface/Nucleus predictor

#21 created 6 years ago by Gervaise Henry
Enhancement
- Closed
closed 5 years ago
Issue Make unique names for QC plots

#20 created 6 years ago by Gervaise Henry
BUG
- Closed
closed 5 years ago
Issue Fix CCA VlnPlot

#19 created 6 years ago by Gervaise Henry
BUG
- Closed
closed 6 years ago
Issue Alter PCA cutoff

#18 created 7 years ago by Gervaise Henry
- Closed
closed 6 years ago
Issue Integrate Jackstraw with multi-core parallel processing

#17 created 7 years ago by Gervaise Henry
- Closed
closed 6 years ago
Issue Fix QuSAGE tSNE ouput filenames

#16 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Test clusterProfiler in lieu of QuSAGE

#15 created 7 years ago by Gervaise Henry
Test
- Closed
closed 5 years ago
Issue Reintegrate nuclear/surface marker prediction into DEG generation

#14 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Allow Epi/St SubClust Merge to have different resolutions

#13 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue LineageSubClust (Epi+St) res tSNE's put in global directory when NoStress analysis selected

#12 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Integrate new suggested technique for large data handling from seurat

#11 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Recreate CI TestData Create r.script

#10 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Change r.scripts to functions

#9 created 7 years ago by Gervaise Henry
- Closed
closed 6 years ago
Issue Make bash.scripts take project from command line and pass to Rscript opt

#8 created 7 years ago by Gervaise Henry
Enhancement
- Closed
closed 5 years ago
Issue Add code to reorder cells in tSNE (especially in NE)

#7 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Fix OE1/2 order in dot plot on sc_DEG.R

#6 created 7 years ago by Gervaise Henry
- Closed
closed 6 years ago
Issue Fix NE display

#5 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago
Issue Allow DEG and Table scripts to run without NE ID

#4 created 7 years ago by Gervaise Henry
- Closed
closed 7 years ago