diff --git a/genesets/genes.deg.Epi.csv b/genesets/genes.deg.Epi.csv index 56b5c01aa34c17f4dcb75276f990a88da8e96708..023ebdeb9f14ff8c4c91fa6532bbbe78d487e44c 100644 --- a/genesets/genes.deg.Epi.csv +++ b/genesets/genes.deg.Epi.csv @@ -1,46 +1,26 @@ "","p_val","avg_logFC","pct.1","pct.2","p_val_adj" -"KRT17",0,2.64673644764602,0.91,0.38,0 "TACSTD2",0,2.58231159715341,0.981,0.282,0 "KRT19",0,2.45083620114524,0.872,0.185,0 -"CLDN4",0,2.33798655274461,0.83,0.229,0 -"S100A2",0,2.14736694057859,0.824,0.336,0 "SFN",0,2.14188708633312,0.849,0.126,0 -"KRT15",0,2.13730992361203,0.705,0.122,0 "KRT8",0,1.98122977079159,0.878,0.156,0 -"SLPI",0,1.97212133924044,0.609,0.126,0 "KRT23",0,1.9475241025607,0.647,0.109,0 "KRT7",0,1.85832624877284,0.762,0.135,0 -"WFDC2",0,1.82603184536208,0.706,0.142,0 -"AQP3",0,1.75707702047555,0.714,0.138,0 "KLF5",0,1.72630607453798,0.808,0.128,0 "KRT18",0,1.65532949882324,0.889,0.214,0 -"FXYD3",0,1.61927290958347,0.793,0.123,0 -"DST",0,1.61622963903937,0.608,0.203,0 -"KRT5",0,1.61473814532591,0.661,0.08,0 -"AZGP1",0,1.59595095398688,0.423,0.063,0 "ERRFI1",0,1.5002166398309,0.671,0.207,0 "PERP",0,1.43991512228113,0.913,0.305,0 -"ELF3",0,1.39422648108229,0.616,0.113,0 "SPINT2",0,1.39239631839613,0.792,0.11,0 -"AREG",0,1.3786787337354,0.444,0.097,0 "ACTG1",0,1.37293440601088,0.992,0.839,0 -"DEFB1",0,1.34503533365797,0.431,0.055,0 "ANXA1",0,1.30604259801877,0.86,0.505,0 -"F3",0,1.30192501208712,0.549,0.139,0 "S100A14",0,1.29343286078518,0.589,0.071,0 -"FHL2",0,1.26558560397518,0.705,0.222,0 -"CLDN7",0,1.23141144972301,0.523,0.056,0 -"CXCL17",0,1.21533791862415,0.375,0.051,0 "PHLDA2",0,1.19530647532187,0.808,0.394,0 "GADD45A",0,1.18964097065961,0.83,0.473,0 "EZR",0,1.15296351442262,0.754,0.253,0 "CLDN1",0,1.11410745865298,0.457,0.064,0 -"EDN1",0,1.10942157265544,0.394,0.057,0 "EHF",0,1.08296266097339,0.531,0.042,0 "SERPINB5",0,1.08108443063903,0.462,0.034,0 "S100A16",0,1.0769615457348,0.858,0.416,0 "LAMB3",0,1.07163577834265,0.532,0.055,0 -"HBEGF",0,1.06681378224294,0.522,0.201,0 "LIMA1",0,1.0513260826661,0.647,0.19,0 "ACTB",0,1.05079544839747,0.992,0.9,0 "VAMP8",0,1.02255596752927,0.607,0.073,0 @@ -50,22 +30,17 @@ "ANXA2",0,1.0000025381118,0.987,0.867,0 "MPZL2",0,0.994372861783234,0.644,0.149,0 "CEACAM1",0,0.98928633223492,0.501,0.086,0 -"ZG16B",0,0.979605923698475,0.429,0.036,0 "CD9",0,0.939348912075797,0.955,0.613,0 -"STK17A",0,0.937434104556968,0.612,0.222,0 "SLC14A1",0,0.921059272534142,0.443,0.052,0 "HMGA1",0,0.882636420446482,0.838,0.494,0 -"ALDH1A3",0,0.876037021829772,0.475,0.13,0 "EPCAM",0,0.870929113732984,0.478,0.045,0 "GSTP1",0,0.869236837206919,0.935,0.801,0 "IRF6",0,0.857811859218995,0.471,0.038,0 "PRSS22",0,0.855291125992551,0.367,0.028,0 "MAST4",0,0.847336115298592,0.678,0.235,0 -"TSPAN1",0,0.832731564261921,0.392,0.04,0 "PRDX5",0,0.822551687733958,0.789,0.438,0 "TNFRSF12A",0,0.808337370482687,0.892,0.483,0 "PHLDA3",0,0.795531021308692,0.494,0.111,0 -"S100A6",0,0.784779708737913,0.981,0.977,0 "JUP",0,0.784069000314477,0.488,0.074,0 "IRF2BP2",0,0.769645482116694,0.557,0.19,0 "ITGA2",0,0.76350554541392,0.595,0.199,0 @@ -73,29 +48,11 @@ "LAMC2",0,0.762354398240465,0.432,0.097,0 "ANXA11",0,0.756371185335363,0.605,0.21,0 "SDC4",0,0.753410062764128,0.503,0.146,0 -"MAL2",0,0.75247074578316,0.355,0.044,0 -"HEBP2",0,0.743409923773958,0.673,0.332,0 -"SDC1",0,0.718054645280138,0.351,0.04,0 "CD47",0,0.71273810568372,0.599,0.22,0 "CXCL16",0,0.704014318224997,0.426,0.071,0 "KLK11",0,0.702290293393313,0.352,0.037,0 -"PPDPF",0,0.70023197306758,0.851,0.544,0 "FAM110C",4.68811670147243e-302,0.81952198692582,0.321,0.023,1.08998713309234e-297 -"LMO7",3.54562564288941e-287,0.776064729336601,0.34,0.045,8.24357961971787e-283 -"LCN2",1.29929397078246e-279,1.98321221152763,0.43,0.13,3.02085848206921e-275 -"GPX2",1.75911908897727e-269,0.849509542409469,0.325,0.043,4.08995188187215e-265 -"RAB11FIP1",3.69529627971261e-269,0.720818871919051,0.341,0.055,8.59156385033181e-265 "HSPB1",7.16440246438237e-267,0.785961433480702,0.893,0.779,1.6657235729689e-262 "HIST1H1C",1.61000939082964e-254,0.719287302119213,0.48,0.184,3.74327183367892e-250 -"AGR2",2.68285137014948e-231,1.0612067064208,0.295,0.044,6.23762943559755e-227 -"KRT14",1.00746316626082e-212,1.65359002160063,0.295,0.056,2.3423518615564e-208 -"MMP7",9.3259028722788e-212,1.30588565024517,0.278,0.042,2.16827241780482e-207 -"KRT13",2.33641834478255e-210,1.63851273006006,0.292,0.056,5.43217265161943e-206 "KRT16",1.07784000202821e-200,1.19125071652985,0.258,0.034,2.50597800471559e-196 -"S100P",8.37182577735041e-198,1.57588848571193,0.35,0.117,1.94644949323397e-193 -"ZFP36L2",2.94915164836327e-188,0.715517638044633,0.652,0.404,6.85677758244461e-184 "MTRNR2L1",4.92681915776347e-166,0.796880879549293,0.498,0.282,1.14548545418001e-161 -"CD24",5.22646762822138e-146,0.921382790745211,0.331,0.131,1.21515372356147e-141 -"DKK1",8.30819005061725e-110,0.756949927526965,0.291,0.115,1.93165418676851e-105 -"GDF15",5.94555679467146e-81,1.18807270039704,0.276,0.139,1.38234195476112e-76 -"MSMB",6.76126653486279e-16,2.27369721884818,0.289,0.234,1.5719944693556e-11 diff --git a/genesets/genes.deg.St.csv b/genesets/genes.deg.St.csv index 015986317ed1c70b827af9f5132112cc0b36f0b9..e1008d64894fc46bb2413c7379f4d648b32fbca2 100644 --- a/genesets/genes.deg.St.csv +++ b/genesets/genes.deg.St.csv @@ -1,159 +1,50 @@ "","p_val","avg_logFC","pct.1","pct.2","p_val_adj" -"C11orf96",0,3.35657963778659,0.708,0.036,0 "IGFBP7",0,3.15209871939752,0.951,0.191,0 -"APOD",0,3.14186916624101,0.321,0.038,0 -"IL6",0,3.06378549509199,0.398,0.015,0 -"PTGDS",0,2.984059301983,0.313,0.016,0 "VIM",0,2.90884774131888,0.944,0.054,0 "SPARCL1",0,2.51839371967671,0.914,0.215,0 -"IGFBP5",0,2.46788937022088,0.496,0.019,0 -"HMOX1",0,2.42981899011226,0.429,0.077,0 -"MGP",0,2.35886107426051,0.707,0.178,0 -"IGFBP6",0,2.32348070236816,0.515,0.105,0 -"DCN",0,2.31379725539251,0.38,0.007,0 -"IFI27",0,2.20757404198392,0.424,0.033,0 -"MT1A",0,2.20743898939655,0.336,0.031,0 -"TIMP1",0,2.17577995338573,0.864,0.693,0 -"CSF3",0,2.12390991586269,0.348,0.016,0 "LGALS1",0,2.07717174859661,0.818,0.194,0 -"CXCL2",0,2.05804809463236,0.377,0.14,0 -"TPM2",0,2.04592836769388,0.475,0.183,0 -"STC1",0,1.88561607702683,0.26,0.005,0 -"ADAMTS4",0,1.81500599991667,0.564,0.007,0 -"AKAP12",0,1.80327333175128,0.599,0.051,0 -"GEM",0,1.79996977665522,0.475,0.094,0 -"PLPP3",0,1.69957895148618,0.613,0.05,0 -"LUM",0,1.66670206288439,0.271,0.005,0 -"SRGN",0,1.64344531928405,0.483,0.016,0 -"CREM",0,1.60448971960675,0.593,0.155,0 "SERPINE1",0,1.53907665601399,0.397,0.043,0 -"MT2A",0,1.4799735243476,0.807,0.61,0 "SPARC",0,1.47829443640837,0.616,0.045,0 -"HLA-DRB1",0,1.47634274469489,0.394,0.069,0 "A2M",0,1.45799667776449,0.495,0.004,0 "PMP22",0,1.44794368173077,0.553,0.014,0 -"ADAMTS9",0,1.44495270614977,0.574,0.164,0 -"CLDN5",0,1.44050806195018,0.303,0.004,0 -"CRISPLD2",0,1.43726540805598,0.406,0.022,0 -"PTN",0,1.42623318419868,0.298,0.012,0 -"TFPI",0,1.42503244810105,0.522,0.016,0 -"COL6A2",0,1.39466732816361,0.471,0.017,0 -"C1S",0,1.38628102492775,0.403,0.036,0 -"C1R",0,1.3692177726174,0.431,0.093,0 -"SPRY1",0,1.3639582174392,0.328,0.035,0 "IGFBP4",0,1.35101177234523,0.665,0.217,0 -"SOCS3",0,1.30902910056725,0.418,0.181,0 -"GSN",0,1.30506520995541,0.703,0.387,0 -"SERPING1",0,1.28834521910818,0.557,0.133,0 -"S100A4",0,1.27948497386243,0.353,0.061,0 -"GNG11",0,1.25187116035782,0.47,0.027,0 -"ICAM1",0,1.25103868390613,0.446,0.039,0 -"HLA-DRA",0,1.2259993006124,0.349,0.084,0 "SLC2A3",0,1.21183184009103,0.427,0.007,0 -"TCF4",0,1.20734785319568,0.454,0.079,0 -"ADAMTS1",0,1.19384763998005,0.395,0.051,0 "GYPC",0,1.1673645902117,0.432,0.012,0 "COL4A1",0,1.13947001893179,0.471,0.018,0 -"MFAP4",0,1.13829254663562,0.276,0.002,0 -"CD93",0,1.12773696486979,0.311,0.004,0 -"GPX3",0,1.12278424381216,0.486,0.168,0 -"MFGE8",0,1.11186494379527,0.4,0.066,0 "FTL",0,1.10570201052532,0.998,0.996,0 "IFITM2",0,1.09622088605487,0.76,0.361,0 -"SOD3",0,1.09468773550915,0.434,0.141,0 "PKIG",0,1.07015872616231,0.478,0.037,0 -"MYLK",0,1.06946804501044,0.302,0.036,0 -"BNIP3L",0,1.06788042106125,0.433,0.19,0 -"BGN",0,1.06276175727964,0.313,0.003,0 -"TSC22D1",0,1.05168004930845,0.686,0.481,0 -"MMP2",0,1.03460951598224,0.281,0.03,0 "SELM",0,1.02476214699384,0.757,0.449,0 -"MAP1B",0,1.01356950057548,0.446,0.092,0 -"CD200",0,1.00409776872784,0.307,0.037,0 -"RCAN1",0,1.00170028016025,0.304,0.057,0 -"THBD",0,0.980596462419037,0.257,0.033,0 "IFITM3",0,0.974068058325107,0.926,0.681,0 "INSIG1",0,0.960355420020766,0.503,0.186,0 -"PLVAP",0,0.952720084540191,0.257,0.002,0 -"PCAT19",0,0.952181434680814,0.312,0.006,0 "EDNRB",0,0.931344504753404,0.282,0.003,0 -"CALCRL",0,0.930942471056838,0.282,0.004,0 -"CST3",0,0.929672005124908,0.88,0.765,0 "BST2",0,0.913124402829383,0.385,0.049,0 "NNMT",0,0.908560912811799,0.285,0.025,0 "CDKN1A",0,0.906912920184886,0.741,0.508,0 -"HLA-E",0,0.894902609452439,0.847,0.677,0 "ARID5A",0,0.894653770761093,0.432,0.106,0 "TMSB4X",0,0.890780468436511,0.994,0.933,0 -"PNP",0,0.871669283948557,0.438,0.16,0 -"HLA-DPA1",0,0.868784894532554,0.277,0.033,0 -"HLA-DRB5",0,0.856338051000458,0.293,0.032,0 "CSRP2",0,0.856307944468502,0.462,0.187,0 -"PRRX1",0,0.850329911778928,0.267,0.002,0 -"EPAS1",0,0.846723163830484,0.452,0.184,0 "CTSL",0,0.831629591236177,0.426,0.168,0 -"MSN",0,0.825510160656912,0.508,0.187,0 "CLIC4",0,0.823840293995555,0.542,0.185,0 "LDHA",0,0.820439830453995,0.854,0.658,0 "LMCD1",0,0.816340194922396,0.278,0.054,0 -"HLA-B",0,0.815462136912527,0.897,0.851,0 "NR4A2",0,0.811533094858348,0.29,0.072,0 "ISG15",0,0.806543148248116,0.318,0.104,0 "PTMA",0,0.806243172762274,0.999,0.995,0 "SOD2",0,0.802390117820088,0.867,0.727,0 -"ADGRL4",0,0.790049027802065,0.27,0.001,0 "HLA-A",0,0.787853857294099,0.942,0.881,0 -"AEBP1",0,0.785610185559771,0.296,0.026,0 -"KLF9",0,0.778492702325455,0.42,0.13,0 "TUBB6",0,0.772256008730784,0.452,0.133,0 "B2M",0,0.769814019730839,0.999,0.993,0 -"COL6A1",0,0.763727402726993,0.303,0.025,0 "TAGLN2",0,0.763119639179336,0.782,0.596,0 "TIMP2",0,0.75568361353686,0.323,0.026,0 -"LMO4",0,0.742279783424695,0.342,0.115,0 "ANKRD28",0,0.735829733099667,0.331,0.074,0 -"HLA-DPB1",0,0.729023816843719,0.316,0.085,0 -"UPP1",0,0.725307402202424,0.289,0.062,0 "MGLL",0,0.721964801625337,0.296,0.034,0 -"ITM2A",0,0.721630260940231,0.271,0.032,0 "PNRC1",0,0.717757180341393,0.871,0.744,0 "LIMS1",0,0.713087383931869,0.433,0.191,0 -"ZEB1",0,0.705878855482179,0.298,0.009,0 -"PDLIM3",0,0.705015400914034,0.263,0.025,0 -"RDX",0,0.702942722577951,0.404,0.158,0 "SLC4A7",0,0.700038612371655,0.423,0.152,0 "NR2F2",0,0.693158207033491,0.275,0.058,0 "SDCBP",2.46573538682373e-303,0.725006527999333,0.769,0.618,5.73283477436517e-299 -"RHOQ",1.26201125468556e-297,0.74817983114089,0.301,0.101,2.93417616714393e-293 -"RHOB",1.04471468902897e-288,1.10062146709578,0.37,0.149,2.42896165199236e-284 -"ADIRF",1.98505986794133e-285,0.969182689910121,0.615,0.361,4.6152641929636e-281 -"CFD",2.38155931175815e-265,2.39969795139114,0.33,0.14,5.53712539983769e-261 -"PTGS2",4.62549512629227e-263,1.7060512398562,0.304,0.113,1.07542761686295e-258 -"DNAJB9",6.80794908033878e-263,0.88797779440846,0.488,0.264,1.58284816117877e-258 -"EMP1",1.48913957056734e-237,0.763723324457966,0.708,0.506,3.46224950156906e-233 -"NR4A1",1.22718049755861e-229,0.837831820630746,0.383,0.18,2.85319465682378e-225 "NFKBIA",4.82553449692386e-210,0.914208640247266,0.824,0.74,1.1219367705348e-205 -"CALD1",1.72500904923064e-204,1.14154292862704,0.617,0.442,4.01064603946125e-200 -"CD74",3.88565437377328e-179,1.20813744245922,0.453,0.288,9.03414641902287e-175 -"CEBPB",1.36300247365197e-172,0.956025111624211,0.617,0.501,3.16898075124083e-168 -"GADD45B",1.00971788613334e-170,1.48685101121296,0.545,0.401,2.34759408526002e-166 -"ID2",2.87216712605345e-170,0.775127853168569,0.335,0.162,6.67778856807426e-166 -"FBLN1",9.23575305864446e-163,2.05188484165657,0.358,0.218,2.14731258613484e-158 -"PDK4",1.00167849804243e-161,1.53851073742064,0.434,0.272,2.32890250794865e-157 -"JUNB",7.54008368734433e-160,0.901090221151883,0.757,0.649,1.75306945730756e-155 -"RHOBTB3",6.82827318365995e-155,0.860102156319912,0.323,0.171,1.58757351520094e-150 -"THBS1",3.25534197878508e-127,0.764440348204278,0.329,0.182,7.56867010067531e-123 -"NDRG1",4.20625936420683e-126,0.745475396464599,0.486,0.354,9.77955302178088e-122 "JUN",2.70455477103472e-109,0.721844399479531,0.693,0.597,6.28808984265572e-105 -"CRYAB",9.73661536133703e-68,0.778831474614523,0.491,0.391,2.26376307151086e-63 -"MEG3",1.29729904607994e-67,0.934605755066499,0.449,0.378,3.01622028213587e-63 -"IER3",2.0785905969469e-65,1.36964112412111,0.635,0.627,4.83272313790153e-61 -"TAGLN",7.14527016840783e-56,1.7655497331943,0.375,0.296,1.66127531415482e-51 "ID3",7.68784962332514e-41,0.694930881048569,0.371,0.289,1.78742503742309e-36 "FOS",8.18615180064779e-39,0.743251405524629,0.524,0.448,1.90328029365061e-34 -"TPM1",2.32360816854733e-35,0.992495037939129,0.432,0.386,5.40238899187254e-31 -"SERPINF1",6.56023844543821e-29,0.857942886733171,0.341,0.303,1.52525543856438e-24 -"ID4",2.26329976161942e-17,0.889562772727801,0.266,0.227,5.26217194576515e-13 -"MYL9",1.91656138962639e-13,1.52224573026194,0.403,0.42,4.45600523088136e-09 -"G0S2",2.70363404946342e-13,1.52837835729027,0.287,0.255,6.28594916500245e-09 -"DNAJB1",5.01436604406916e-11,0.785501506000992,0.461,0.463,1.16584010524608e-06