diff --git a/bash.scripts/sc_TissueMapper-D17PrF.sh b/bash.scripts/sc_TissueMapper-D17PrF.sh new file mode 100644 index 0000000000000000000000000000000000000000..af8272b57f7065a2ff2c39ccb08e18bcc567dd02 --- /dev/null +++ b/bash.scripts/sc_TissueMapper-D17PrF.sh @@ -0,0 +1,13 @@ +#!/bin/bash +#SBATCH --job-name R_FullAnalysis +#SBATCH -p 256GB,256GBv1,384GB +#SBATCH -N 1 +#SBATCH -t 7-0:0:0 +#SBATCH -o job_%j.out +#SBATCH -e job_%j.out +#SBATCH --mail-type ALL +#SBATCH --mail-user gervaise.henry@utsouthwestern.edu + +module load R/3.4.1-gccmkl + +Rscript ../r.scripts/sc-TissueMapper_RUN.D17.R \ No newline at end of file diff --git a/bash.scripts/sc_TissueMapper-DPrF.sh b/bash.scripts/sc_TissueMapper-DPrF.sh new file mode 100644 index 0000000000000000000000000000000000000000..c38f8a99a337eaec700828c452fcf444ca0e0ea0 --- /dev/null +++ b/bash.scripts/sc_TissueMapper-DPrF.sh @@ -0,0 +1,13 @@ +#!/bin/bash +#SBATCH --job-name R_FullAnalysis +#SBATCH -p 256GB,256GBv1,384GB +#SBATCH -N 1 +#SBATCH -t 7-0:0:0 +#SBATCH -o job_%j.out +#SBATCH -e job_%j.out +#SBATCH --mail-type ALL +#SBATCH --mail-user gervaise.henry@utsouthwestern.edu + +module load R/3.4.1-gccmkl + +Rscript ../r.scripts/sc-TissueMapper_RUN.D.R \ No newline at end of file diff --git a/r.scripts/sc-TissueMapper_RUN.D.R b/r.scripts/sc-TissueMapper_RUN.D.R index 8c6c44b77637f34647b8b764288e8e3c11d9ce56..5212d741e46146a98dfbb61258abc35826796eab 100644 --- a/r.scripts/sc-TissueMapper_RUN.D.R +++ b/r.scripts/sc-TissueMapper_RUN.D.R @@ -7,7 +7,7 @@ library(fBasics) library(pastecs) library(qusage) -source("sc-TissueMapper.R") +source("../r.scripts/sc-TissueMapper.R") #Create folder structure setwd("../") diff --git a/r.scripts/sc-TissueMapper_RUN.D17.R b/r.scripts/sc-TissueMapper_RUN.D17.R index 8dce59e40162837cf46880692819052036d5c7bb..eca50e40cafcb346a3fac032052585ccef12c01d 100644 --- a/r.scripts/sc-TissueMapper_RUN.D17.R +++ b/r.scripts/sc-TissueMapper_RUN.D17.R @@ -7,7 +7,7 @@ library(fBasics) library(pastecs) library(qusage) -source("sc-TissueMapper.R") +source("../r.scripts/sc-TissueMapper.R") #Create folder structure setwd("../") diff --git a/r.scripts/sc-TissueMapper_RUN.D27.R b/r.scripts/sc-TissueMapper_RUN.D27.R index 6f4b068c739845c0412e127bd3260024ddc45abb..89fa46e34891048753e285ccfe6ee473c1959a47 100644 --- a/r.scripts/sc-TissueMapper_RUN.D27.R +++ b/r.scripts/sc-TissueMapper_RUN.D27.R @@ -7,7 +7,7 @@ library(fBasics) library(pastecs) library(qusage) -source("sc-TissueMapper.R") +source("../r.scripts/sc-TissueMapper.R") #Create folder structure setwd("../")