Commit f259f6e2 authored by Gervaise Henry's avatar Gervaise Henry 🤠
Browse files

Fix dehash display

parent 305c7585
...@@ -664,7 +664,7 @@ scCluster <- function(sc10x,res=0.1,red="pca",dim,print="tsne",folder=FALSE){ ...@@ -664,7 +664,7 @@ scCluster <- function(sc10x,res=0.1,red="pca",dim,print="tsne",folder=FALSE){
dev.off() dev.off()
}} }}
for (i in c("samples","HTO_maxID","hashID")[c("samples","HTO_maxID","hash.ID") %in% colnames(sc10x@meta.data)]){ for (i in c("samples","HTO_maxID","hash.ID")[c("samples","HTO_maxID","hash.ID") %in% colnames(sc10x@meta.data)]){
plot1 <- DimPlot(sc10x,reduction="pca",group.by=i) plot1 <- DimPlot(sc10x,reduction="pca",group.by=i)
plot2 <- DimPlot(sc10x,reduction="tsne",group.by=i) plot2 <- DimPlot(sc10x,reduction="tsne",group.by=i)
plot3 <- DimPlot(sc10x,reduction="umap",group.by=i) plot3 <- DimPlot(sc10x,reduction="umap",group.by=i)
......
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