Skip to content
GitLab
Menu
Projects
Groups
Snippets
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in / Register
Toggle navigation
Menu
Open sidebar
Strand Lab
sc-TissueMapper
Commits
908e1bbc
Commit
908e1bbc
authored
Jan 12, 2019
by
Gervaise Henry
🤠
Browse files
Fix redudnant rm for sc_QC parameters
parent
196cb978
Changes
1
Show whitespace changes
Inline
Side-by-side
r.scripts/sc-TissueMapper_RUN.R
View file @
908e1bbc
...
...
@@ -32,9 +32,6 @@ counts.cell.raw <- results[[2]]
counts.gene.raw
<-
results
[[
3
]]
counts.cell.filtered
<-
results
[[
4
]]
counts.gene.filtered
<-
results
[[
5
]]
rm
(
lg
)
rm
(
hg
)
rm
(
hm
)
rm
(
results
)
results
<-
scCellCycle
(
sc10x
,
sub
=
FALSE
)
...
...
@@ -44,9 +41,9 @@ genes.g2m <- results[[3]]
rm
(
results
)
sc10x.l
<-
list
()
sc10x.l
[[
"
D17
"
]]
<-
subset
(
sc10x
,
subset
=
D
17
==
"D17
"
)
sc10x.l
[[
"
D27
"
]]
<-
subset
(
sc10x
,
subset
=
D27
==
"D27
"
)
sc10x.l
[[
"
D35
"
]]
<-
subset
(
sc10x
,
subset
=
D35
==
"D35
"
)
sc10x.l
[[
"
Pd
"
]]
<-
subset
(
sc10x
,
subset
=
D
onor
==
"Donor
"
)
sc10x.l
[[
"
Pb
"
]]
<-
subset
(
sc10x
,
subset
=
BPH
==
"BPH
"
)
sc10x.l
[[
"
Pc
"
]]
<-
subset
(
sc10x
,
subset
=
Cancer
==
"Cancer
"
)
sc10x
<-
scCCA
(
sc10x.l
)
rm
(
sc10x.l
)
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment