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Strand Lab
sc-TissueMapper
Commits
5742d25e
Commit
5742d25e
authored
Jan 12, 2019
by
Gervaise Henry
🤠
Browse files
Put sc_QC parameters into the call
parent
0fc0965a
Changes
1
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Inline
Side-by-side
r.scripts/sc-TissueMapper_RUN.R
View file @
5742d25e
...
...
@@ -24,10 +24,7 @@ scFolders()
sc10x
<-
scLoad
(
p
=
"Pd"
)
lg
=
500
hg
=
2500
hm
=
0.1
results
<-
scQC
(
sc10x
,
lg
=
lg
,
hg
=
hg
,
hm
=
hm
,
sub
=
FALSE
)
results
<-
scQC
(
sc10x
,
lg
=
500
,
hg
=
2500
,
hm
=
0.1
,
sub
=
FALSE
)
sc10x
<-
results
[[
1
]]
counts.cell.raw
<-
results
[[
2
]]
counts.gene.raw
<-
results
[[
3
]]
...
...
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