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Commit 11f9d723 authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Renew correct project name in seurat object after cca

parent 127fdb34
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r.scripts/sc-TissueMapper_RUN.R
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...@@ -53,6 +53,7 @@ sc10x.l[["Pc"]] <- subset(sc10x,subset= Cancer=="Cancer") ...@@ -53,6 +53,7 @@ sc10x.l[["Pc"]] <- subset(sc10x,subset= Cancer=="Cancer")
sc10x <- scCCA(sc10x.l) sc10x <- scCCA(sc10x.l)
rm(sc10x.l) rm(sc10x.l)
sc10x@project.name <- project.name
#gc() #gc()
sc10x <- ScaleData(object=sc10x,vars.to.regress=c("nFeature_RNA","percent.mito","S.Score","G2M.Score"),do.par=TRUE,num.cores=45,verbose=FALSE) sc10x <- ScaleData(object=sc10x,vars.to.regress=c("nFeature_RNA","percent.mito","S.Score","G2M.Score"),do.par=TRUE,num.cores=45,verbose=FALSE)
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