From 2b6f77bb1f907e5f7a0d4f82ce8c817223a5182a Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Wed, 28 Oct 2020 11:26:35 -0500
Subject: [PATCH] Add LUT thumbnails
---
layouts/custom/repository.html | 37 +++++++++++++++++++++++-----------
1 file changed, 25 insertions(+), 12 deletions(-)
diff --git a/layouts/custom/repository.html b/layouts/custom/repository.html
index 9e00e80..6589ac0 100644
--- a/layouts/custom/repository.html
+++ b/layouts/custom/repository.html
@@ -120,6 +120,7 @@
<tr>
<th>H&E Thumbnail (Pr)</th>
<th>H&E Thumbnail (Bl)</th>
+ <th>H&E Thumbnail (LUT)</th>
<th>Disease</th>
<th>ID</th>
<th>Age</th>
@@ -853,14 +854,17 @@
let newRow = table.insertRow(-1)
var row_he_pr = newRow.insertCell(0)
var row_he_bl = newRow.insertCell(1)
- var row_ds = newRow.insertCell(2)
- var row_si = newRow.insertCell(3)
- var row_ag = newRow.insertCell(4)
- var row_et = newRow.insertCell(5)
+ var row_he_lut = newRow.insertCell(2)
+ var row_ds = newRow.insertCell(3)
+ var row_si = newRow.insertCell(4)
+ var row_ag = newRow.insertCell(5)
+ var row_et = newRow.insertCell(6)
var thm_pr = document.createElement("img")
var thm_pr_file
var thm_bl = document.createElement("img")
var thm_bl_file
+ var thm_lut = document.createElement("img")
+ var thm_lut_file
if (repo[i]["Disease Status"] == "Donor") {
var dis_status = "D"
} else {
@@ -868,27 +872,36 @@
}
for (j = 0; j < thumbnails.length; j++) {
if (thumbnails[j].patient == dis_status + ("000"+repo[i]["Study ID"]).slice(-3)) {
- thm_pr_file = thumbnails[j].Pr
- thm_pr.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Pr/" + thm_pr_file
- thm_bl_file = thumbnails[j].Bl
- thm_bl.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Bl/" + thm_bl_file
+ if (thumbnails[j].Pr != ""){
+ thm_pr_file = thumbnails[j].Pr
+ thm_pr.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Pr/" + thm_pr_file
+ }
+ if (thumbnails[j].Bl != ""){
+ thm_bl_file = thumbnails[j].Bl
+ thm_bl.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Bl/" + thm_bl_file
+ }
+ if (thumbnails[j].LUT != ""){
+ thm_lut_file = thumbnails[j].LUT
+ thm_lut.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/LUT/" + thm_lut_file
+ }
break
}
}
-
- //thm_pr.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/Pr/" + dis_status + ("000"+repo[i]["Study ID"]).slice(-3) + ".00.Pr.jpg"
thm_pr.height = "75"
row_he_pr.appendChild(thm_pr)
thm_pr.onerror=function(){
this.remove()
}
-
- //thm_bl.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/Bl/" + dis_status + ("000"+repo[i]["Study ID"]).slice(-3) + ".00.Bl.jpg"
thm_bl.height = "75"
row_he_bl.appendChild(thm_bl)
thm_bl.onerror=function(){
this.remove()
}
+ thm_lut.height = "75"
+ row_he_lut.appendChild(thm_lut)
+ thm_lut.onerror=function(){
+ this.remove()
+ }
row_ds.innerHTML = repo[i]["Disease Status"]
row_si.innerHTML = repo[i]["Study ID"]
row_ag.innerHTML = repo[i].Age
--
GitLab