diff --git a/layouts/custom/repository.html b/layouts/custom/repository.html index 9e00e8067be44a5253f445a0e3b4ca36392915b4..6589ac0d1b6084d88f46ea79cad5d14c65bb8a52 100644 --- a/layouts/custom/repository.html +++ b/layouts/custom/repository.html @@ -120,6 +120,7 @@ <tr> <th>H&E Thumbnail (Pr)</th> <th>H&E Thumbnail (Bl)</th> + <th>H&E Thumbnail (LUT)</th> <th>Disease</th> <th>ID</th> <th>Age</th> @@ -853,14 +854,17 @@ let newRow = table.insertRow(-1) var row_he_pr = newRow.insertCell(0) var row_he_bl = newRow.insertCell(1) - var row_ds = newRow.insertCell(2) - var row_si = newRow.insertCell(3) - var row_ag = newRow.insertCell(4) - var row_et = newRow.insertCell(5) + var row_he_lut = newRow.insertCell(2) + var row_ds = newRow.insertCell(3) + var row_si = newRow.insertCell(4) + var row_ag = newRow.insertCell(5) + var row_et = newRow.insertCell(6) var thm_pr = document.createElement("img") var thm_pr_file var thm_bl = document.createElement("img") var thm_bl_file + var thm_lut = document.createElement("img") + var thm_lut_file if (repo[i]["Disease Status"] == "Donor") { var dis_status = "D" } else { @@ -868,27 +872,36 @@ } for (j = 0; j < thumbnails.length; j++) { if (thumbnails[j].patient == dis_status + ("000"+repo[i]["Study ID"]).slice(-3)) { - thm_pr_file = thumbnails[j].Pr - thm_pr.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Pr/" + thm_pr_file - thm_bl_file = thumbnails[j].Bl - thm_bl.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Bl/" + thm_bl_file + if (thumbnails[j].Pr != ""){ + thm_pr_file = thumbnails[j].Pr + thm_pr.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Pr/" + thm_pr_file + } + if (thumbnails[j].Bl != ""){ + thm_bl_file = thumbnails[j].Bl + thm_bl.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/Bl/" + thm_bl_file + } + if (thumbnails[j].LUT != ""){ + thm_lut_file = thumbnails[j].LUT + thm_lut.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/jpg/LUT/" + thm_lut_file + } break } } - - //thm_pr.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/Pr/" + dis_status + ("000"+repo[i]["Study ID"]).slice(-3) + ".00.Pr.jpg" thm_pr.height = "75" row_he_pr.appendChild(thm_pr) thm_pr.onerror=function(){ this.remove() } - - //thm_bl.src = "https://s3.us-east-2.amazonaws.com/biorepo.images.thumbnails/Bl/" + dis_status + ("000"+repo[i]["Study ID"]).slice(-3) + ".00.Bl.jpg" thm_bl.height = "75" row_he_bl.appendChild(thm_bl) thm_bl.onerror=function(){ this.remove() } + thm_lut.height = "75" + row_he_lut.appendChild(thm_lut) + thm_lut.onerror=function(){ + this.remove() + } row_ds.innerHTML = repo[i]["Disease Status"] row_si.innerHTML = repo[i]["Study ID"] row_ag.innerHTML = repo[i].Age