From 7e31feba8705e1630c0ef9b753cda5992d1c0a9b Mon Sep 17 00:00:00 2001 From: Zhiyu <zhiyu.zhao@utsouthwestern.edu> Date: Mon, 17 Aug 2020 09:32:11 -0500 Subject: [PATCH] 08172020 --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index f030bb1..57a0cca 100755 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ This is an R program to visualize and analyze -omics data such as those from microarray, metabolomics and proteomics experiments. Next-generation sequencing such as RNA-Seq and single-cell RNA-Seq analyses are to be supported in the future. The input of this program is intensity or count data supplied in a list or table along with parameter settings, all in an Excel file. The output is an Excel file with figures and analysis result sheets. -## Current version: 1.7.3. Tested R version: 4.0.2, 3.5.1 +## Current version: 1.7.3. Tested R versions: 4.0.2, 3.5.1. ## How to run this tool: @@ -22,7 +22,7 @@ sh /path_to_the_program/run_analysis.sh /input_path/your_data_file.xlsx /outp ``` 2. Running on your local machine. Make sure R is installed and you can run the Rscript command from a command line tool such as a Linux terminal or Windows CMD / PowerShell. ``` -Rscript /path_to_the_program/ODA_version.R /input_path/your_data_file.xlsx /output_path/your_result_file.xlsx +Rscript /path_to_the_program/ODA.R /input_path/your_data_file.xlsx /output_path/your_result_file.xlsx ``` * For the first time running this program, you will need internet access so that the program can auto-download necessary R packages. If you want to install packages to a different directory, find the following line from the ODA.R and change it. ``` -- GitLab