diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index cd4b7eea6228c1ac9af833eed81330d1172be281..58145181a659f18737e2d1aacef53fb13416d7e3 100755 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -6,9 +6,28 @@ before_script: stages: - astrocyte + - simple astrocyte_check: stage: astrocyte script: - astrocyte_cli check ../tcga_shiny + artifacts: + expire_in: 2 days + retry: + max: 2 + when: + - always +simple: + stage: simple + except: + - tags + script: + - nextflow run workflow/main.nf + artifacts: + expire_in: 2 days + retry: + max: 2 + when: + - always \ No newline at end of file diff --git a/CHANGELOG b/CHANGELOG new file mode 100644 index 0000000000000000000000000000000000000000..13ef97bad4aabce72e381d213b525b72f0cb60d7 --- /dev/null +++ b/CHANGELOG @@ -0,0 +1,7 @@ +# v1.0.0 (in development) +**User Facing** +* Working version + +**Background** + +*Known Bugs* \ No newline at end of file diff --git a/README.md b/README.md index c7b40354564adad1ba04f74772a20096ee52f2fb..5409a4bab8701be62bf68bc10544294a7ba08ab6 100755 --- a/README.md +++ b/README.md @@ -1,3 +1,7 @@ +|*master*|*develop*| +|:-:|:-:| +|[](https://git.biohpc.swmed.edu/BICF/Astrocyte/tcga_shiny/commits/master)|[](https://git.biohpc.swmed.edu/BICF/Astrocyte/tcga_shiny/commits/develop)| + Author: Spencer Barnes <Spencer.Barnes@UTSouthwestern.edu> Date: January 25, 2019 Description: Shiny app for analyzing TCGA data for frequently asked requests through the Help-Desk. diff --git a/astrocyte_pkg.yml b/astrocyte_pkg.yml index f00e8d6a74bb68fed739f68ccc16df3eef45bdc3..046f892acc321c81fabd24d482437af5e51dae98 100755 --- a/astrocyte_pkg.yml +++ b/astrocyte_pkg.yml @@ -9,7 +9,7 @@ # A unique identifier for the workflow package, text/underscores only name: 'tcga_shiny' # Who wrote this? -author: 'Spencer Barnes, Gervaise Henry and Venkat Malladi' +author: 'Spencer Barnes, Gervaise H. Henry, Jeremy Mathews and Venkat Malladi' # A contact email address for questions email: 'bicf@utsouthwestern.edu' # A more informative title for the workflow package