diff --git a/vizapp/global.R b/vizapp/global.R index d00424ce97ae1fb493ce1d43a2912b309e669980..6f794734d26b748cbd45a1095d21cd8accd5fef2 100644 --- a/vizapp/global.R +++ b/vizapp/global.R @@ -1 +1 @@ -data.dir <- Sys.getenv('outputDir') +data.dir <- paste0(Sys.getenv('outputDir'),"/") \ No newline at end of file diff --git a/vizapp/ui.R b/vizapp/ui.R index 0c0bc785622122f655742949bb361261390197bd..35b05708c2df0849f21f08c9950083b898c27915 100644 --- a/vizapp/ui.R +++ b/vizapp/ui.R @@ -14,7 +14,7 @@ shinyUI( conditionalPanel(condition="input.operation=='Survival'", selectInput("cancerType2","Select a cancer type", choices = substr(list.files(paste0(data.dir,"Expression/"),pattern=".txt"),1, - nchar(list.files(paste0(data.dir,"Expression/)",pattern=".txt"))-4)), + nchar(list.files(paste0(data.dir,"Expression/"),pattern=".txt"))-4)), textInput("gene2","Please input one gene of interest",placeholder = "Gene name ie BRCA1"), selectInput("operation2","Select automatic or manual cutoff", choices = c("Automatic", "Manual"))