sra_pipeline issueshttps://git.biohpc.swmed.edu/BICF/Astrocyte/sra_pipeline/-/issues2020-06-01T13:28:23-05:00https://git.biohpc.swmed.edu/BICF/Astrocyte/sra_pipeline/-/issues/15Convert SOLID sequencing to basecall2020-06-01T13:28:23-05:00Venkat MalladiConvert SOLID sequencing to basecallSolid seqencing comes back as csqual and csfasta by default.
Use the -B option to convert to base call output to run in our pipelinesSolid seqencing comes back as csqual and csfasta by default.
Use the -B option to convert to base call output to run in our pipelinesJeremy MathewsJeremy Mathewshttps://git.biohpc.swmed.edu/BICF/Astrocyte/sra_pipeline/-/issues/7correct check design2019-08-28T10:47:28-05:00Jonathan Gesellcorrect check designCheck Design neededCheck Design neededJonathan GesellJonathan Gesellhttps://git.biohpc.swmed.edu/BICF/Astrocyte/sra_pipeline/-/issues/5Correct config2019-07-05T10:01:11-05:00Jonathan GesellCorrect configCorrecting the config files for Astrocyte and general deploymentCorrecting the config files for Astrocyte and general deploymentJonathan GesellJonathan Gesell