rnaseq merge requestshttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests2018-11-19T11:11:42-06:00https://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/1Shiny update2018-11-19T11:11:42-06:00Danni LuoShiny updateupdate shiny user interface,
please check it [here](http://129.112.142.77:3838/rnaseq/vizapp/)
update shiny user interface,
please check it [here](http://129.112.142.77:3838/rnaseq/vizapp/)
Venkat MalladiVenkat Malladihttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/2WIP: Resolve "Update RNASeq Shiny Code"2018-11-19T11:07:43-06:00Danni LuoWIP: Resolve "Update RNASeq Shiny Code"Closes #3Closes #3https://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/3Corrected issue where a gene with 0 read counts could crash the dea.R scripts.2018-06-27T16:04:40-05:00Jonathan GesellCorrected issue where a gene with 0 read counts could crash the dea.R scripts.Corrected the issue where a gene might not have any reads and crash the pipeline.Corrected the issue where a gene might not have any reads and crash the pipeline.Brandi CantarelBrandi Cantarelhttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/4updated submodules process_scripts2019-04-26T23:12:43-05:00Venkat Malladiupdated submodules process_scriptsCloses #11Closes #11Venkat MalladiVenkat Malladihttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/5documentation update on design file explanation2019-05-02T20:44:16-05:00Brandi Cantareldocumentation update on design file explanationhttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/6Resolve "Fix CI"2019-06-11T16:35:59-05:00Jeremy MathewsResolve "Fix CI"Closes #14Closes #14https://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/7Resolve "Check file inputs"2019-07-08T21:20:42-05:00Jeremy MathewsResolve "Check file inputs"Closes #15 #16Closes #15 #16Brandi CantarelBrandi Cantarelhttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/8add in error strategy2019-08-28T09:32:47-05:00Jeremy Mathewsadd in error strategyCloses #18Closes #18Venkat MalladiVenkat Malladihttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/9Fix documentationn for choosing only fastq files.2020-01-07T11:33:51-06:00Venkat MalladiFix documentationn for choosing only fastq files.Closes #19Closes #19Venkat MalladiVenkat Malladihttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/10Singularity2021-05-20T14:51:08-05:00Brandi CantarelSingularityhttps://git.biohpc.swmed.edu/BICF/Astrocyte/rnaseq/-/merge_requests/11Fix bugs in published version 2.0.02022-03-22T14:17:13-05:00Peng LianFix bugs in published version 2.0.0Fix bugs so that it can run more smoothly on the Astrocyte PlatformFix bugs so that it can run more smoothly on the Astrocyte Platform