From d01043a30605923414db3c6fbcbccc2f08eaa5b4 Mon Sep 17 00:00:00 2001
From: Peng Lian <Peng.Lian@UTSouthwestern.edu>
Date: Wed, 2 Mar 2022 23:52:06 -0600
Subject: [PATCH] Escape slash for groove
---
workflow/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index fd9460a..41a4a5d 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -50,7 +50,7 @@ process checkdesignfile {
script:
"""
# convert dos \r to unix format
- sed -i 's/\x0D$//' design.ori.txt
+ sed -i 's/\\x0D$//' design.ori.txt
bash $repoDir/process_scripts/design_file/checkdesignfile.sh ${params.pairs} design.ori.txt
"""
}
--
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