From b9d31a3de552397d6a676c9ff0e746342bb266bc Mon Sep 17 00:00:00 2001
From: Brandi Cantarel <brandi.cantarel@utsouthwestern.edu>
Date: Mon, 12 Mar 2018 15:50:26 -0500
Subject: [PATCH] Update .gitlab-ci.yml
---
.gitlab-ci.yml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 5d8eeb5..7f6f3ac 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -13,7 +13,7 @@ before_script:
stages:
- integration
-test_human
+test_human:
stage: integration
script:
- nextflow run workflow/main.nf --input test_data/ --design ${CLEAN_REPO_PATH}/test_data/design.rnaseq.txt --output ${CLEAN_REPO_PATH}/human_output
@@ -22,7 +22,7 @@ test_human
- ${CLEAN_REPO_PATH}
expire_in: 2 days
-test_mouse
+test_mouse:
stage: integration
script:
- nextflow run workflow/main.nf --input test_data/ --design ${CLEAN_REPO_PATH}/test_data/mouse_se.design.txt --pairs se --fusion skip --genome /project/shared/bicf_workflow_ref/GRCm38 --markdups null --output ${CLEAN_REPO_PATH}/mouse_output
--
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