From a76d224b53b5f98cc9c909499122c1c2cd6bf62b Mon Sep 17 00:00:00 2001
From: Peng Lian <Peng.Lian@UTSouthwestern.edu>
Date: Wed, 2 Mar 2022 16:10:31 -0600
Subject: [PATCH] Update container structuralvariant
---
astrocyte_pkg.yml | 2 +-
workflow/configs/nextflow.config | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/astrocyte_pkg.yml b/astrocyte_pkg.yml
index efda89a..a7b3480 100644
--- a/astrocyte_pkg.yml
+++ b/astrocyte_pkg.yml
@@ -74,7 +74,7 @@ workflow_containers:
- docker://goalconsortium/profiling_qc:1.0.9
- docker://goalconsortium/dna_alignment:1.0.9
- docker://goalconsortium/variantcalling:1.0.9
- - docker://goalconsortium/structuralvariant:1.1.2
+ - docker://goalconsortium/structuralvariant:1.1.4
- docker://goalconsortium/starfusion:1.0.9
- docker://goalconsortium/rna_alignment:1.0.9
- docker://goalconsortium/rna_gene_abundance:1.1.3
diff --git a/workflow/configs/nextflow.config b/workflow/configs/nextflow.config
index 6a1c64c..6ac239f 100644
--- a/workflow/configs/nextflow.config
+++ b/workflow/configs/nextflow.config
@@ -22,7 +22,7 @@ process {
container = 'goalconsortium/variantcalling:1.0.9'
}
withLabel: structuralvariant {
- container = 'goalconsortium/structuralvariant:1.1.2'
+ container = 'goalconsortium/structuralvariant:1.1.4'
}
withLabel: starfusion {
container = 'goalconsortium/starfusion:1.0.9'
--
GitLab