From 86736f17a8693740cc03d16cd8619aeab4e7dfab Mon Sep 17 00:00:00 2001
From: Peng Lian <Peng.Lian@UTSouthwestern.edu>
Date: Wed, 2 Mar 2022 23:54:46 -0600
Subject: [PATCH] Escape slash for groove
---
workflow/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index 41a4a5d..5ceaf89 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -50,7 +50,7 @@ process checkdesignfile {
script:
"""
# convert dos \r to unix format
- sed -i 's/\\x0D$//' design.ori.txt
+ sed -i 's/\\x0D\$//' design.ori.txt
bash $repoDir/process_scripts/design_file/checkdesignfile.sh ${params.pairs} design.ori.txt
"""
}
--
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