Commit 874203a1 authored by Spencer Barnes's avatar Spencer Barnes
Browse files

correct ci yml

parent 1383503a
Pipeline #7421 failed with stages
in 186 minutes and 35 seconds
......@@ -28,7 +28,7 @@ GRCh38-0.0.1:
- tags
script:
- NXF_OPTS="-Dleveldb.mmap=false" nextflow run ./workflow/main.nf --designFile "./test_data/test_design_se.txt" --reads "./test_data/*fastq.gz" --genome "GRCh38"
- pytest -m pairedend
- pytest -m singleend
- pytest -m methData_se
- pytest -m trimData_se
artifacts:
......@@ -50,7 +50,7 @@ mm10-0.0.1:
script:
- NXF_OPTS="-Dleveldb.mmap=false" nextflow run ./workflow/main.nf --pairedEnd --designFile "./test_data/test_design_pe.txt" --reads "./test_data/*fastq.gz"
- pytest -m methData_pe
- pytest -m singleend
- pytest -m pairedend
- pytest -m trimData_pe
artifacts:
name: "$CI_JOB_NAME"
......
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