Merge requests · BICF / Astrocyte / chipseq_analysis

Merge trains

Resolve "Paired-end Diffbind peaks gives different answer" after changing random 2 of 2 checklist items completed

!69 · created Apr 17, 2020 by Venkat Malladi 1.1.0 master
Test bug
updated Apr 20, 2020
Changed singularity container to allow for rendering of references. 3 of 3 checklist items completed

!65 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 18, 2020
Resolve "Python Version not in Software Version" 3 of 3 checklist items completed

!64 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Mar 02, 2020
Resolve "Single Rep Pool and Pseudo" 3 of 3 checklist items completed

!63 · created Feb 12, 2020 by Venkat Malladi 1.1.0 master
bug
- Merged
- 3
updated Mar 24, 2020
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Remove artifacts.

!61 · created Jan 28, 2020 by Venkat Malladi 1.1.1 master
bug
- Merged
updated Jan 28, 2020
Update paired-end diff to skip this test. 3 of 3 checklist items completed

!60 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
updated Sep 17, 2019
WIP: Resolve "Testing fails on new update"

!59 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
- Closed
updated Sep 16, 2019
Fix fasta file refernce and add check for correct genome version 6 of 6 checklist items completed

!49 · created May 31, 2019 by Jeremy Mathews 1.0.6 master
bug enhancement
updated May 31, 2019
Resolve "Astrocyte Bug Fixes" 3 of 3 checklist items completed

!46 · created May 16, 2019 by Venkat Malladi 1.0.4 master
bug
updated May 16, 2019
updated script pool_and_psuedoreplicates

!43 · created May 15, 2019 by Venkat Malladi 1.0.4 master
bug
updated May 15, 2019
Add in python3 for motif serach.

!40 · created May 15, 2019 by Venkat Malladi 1.0.4 master
bug
updated May 15, 2019
Resolve "DesignFile path not followed"

!38 · created May 06, 2019 by Venkat Malladi master
bug
updated May 06, 2019
Fix astrocyte yml name fix.

!37 · created May 06, 2019 by Venkat Malladi master
bug
- Merged
updated May 06, 2019
Resolve "Missing modules"

!32 · created Apr 23, 2019 by Venkat Malladi 1.0.0 master
bug
- Merged
updated Apr 23, 2019
Update tests.

!31 · created Apr 22, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 22, 2019
Resolve "Update Astrocyte documentation and errors"

!30 · created Apr 22, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 22, 2019
Fix variable assignment.

!29 · created Apr 22, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 22, 2019
Move single-end to run on astrocyte.

!28 · created Apr 22, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 22, 2019
Update tests and import of yaml.

!24 · created Apr 20, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 20, 2019