Merge requests · BICF / Astrocyte / chipseq_analysis

Merge trains

Resolve "Update deeptools"

!8 · created Oct 18, 2017 by Venkat Malladi 1.0.0 master
updated Oct 18, 2017
Added new Docker file for motif search (named meme-5.5.4) installed from...

!76 · created Oct 16, 2024 by Thamer Alsulaiman master
updated Feb 28, 2025
Containerized version with meme-chip 5.5.4

!75 · created Sep 05, 2024 by Thamer Alsulaiman
updated Feb 28, 2025
Release 1.1.3 0 of 7 checklist items completed

!73 · created Aug 16, 2020 by Venkat Malladi master
updated Aug 16, 2020
Issue3087 annotation fix 0 of 7 checklist items completed

!72 · created Aug 07, 2020 by Spencer Barnes
updated Aug 07, 2020
Add in pipelinetracking. 0 of 1 checklist item completed

!70 · created Jun 21, 2020 by Venkat Malladi
- Merged
- 1
updated Jun 23, 2020
Ci merge test

!68 · created Mar 28, 2020 by Venkat Malladi master
- Merged
- 6
updated Apr 16, 2020
Update test_generate_software_versions.py

!56 · created Jul 19, 2019 by Jeremy Mathews master
updated Jul 22, 2019
Update references.md

!52 · created Jul 10, 2019 by Jeremy Mathews master
updated Jul 11, 2019
Fix spacing.

!48 · created May 17, 2019 by Venkat Malladi master
documentation
- Merged
updated May 17, 2019
Resolve "Add license" 2 of 2 checklist items completed

!47 · created May 17, 2019 by Venkat Malladi master
documentation enhancement
updated May 17, 2019
Add in initial template.

!45 · created May 15, 2019 by Venkat Malladi master
enhancement
updated May 15, 2019
Resolve "DesignFile path not followed"

!38 · created May 06, 2019 by Venkat Malladi master
bug
updated May 06, 2019
Fix astrocyte yml name fix.

!37 · created May 06, 2019 by Venkat Malladi master
bug
- Merged
updated May 06, 2019
Update design_example.txt

!36 · created May 02, 2019 by Spencer Barnes master
- Closed
updated May 02, 2019
Resolve "New folders for all steps"

!22 · created Mar 16, 2019 by Venkat Malladi master
updated Mar 16, 2019
Resolve "skip motif search and diff bind"

!21 · created Mar 09, 2019 by Venkat Malladi master
- Merged
updated Mar 12, 2019
Resolve "Use SampleIds/ Experiment Id as file names throughtout pipeline"

!20 · created Mar 09, 2019 by Venkat Malladi master
- Merged
updated Mar 10, 2019
27 pdfs plots

!19 · created Jan 31, 2019 by Venkat Malladi master
updated Jan 31, 2019
Add option for outdir.

!16 · created Jan 06, 2019 by Venkat Malladi master
- Merged
- 1
updated Jan 06, 2019