Issues · BICF / Astrocyte / chipseq_analysis

New issue

Annotation file is missing data

#87 · created Jul 06, 2020 by Venkat Malladi 2.0.0 bug
- CLOSED
- 1
- 0
updated Aug 07, 2020
Update to astrocyte 0.3.1

#86 · created Jun 26, 2020 by Venkat Malladi 2.0.0
- CLOSED
- 0
updated Jul 01, 2020
Track chip-seq usage

#84 · created Jun 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 1
updated Jul 01, 2020
Rename Plot profile to be consistent with naming

#75 · created Feb 05, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Apr 21, 2020
Paired-end Diffbind peaks gives different answer

#78 · created Mar 25, 2020 by Venkat Malladi 1.1.0 Test bug
- CLOSED
- 1
- 0
updated Apr 20, 2020
Add in Fastqc

#1 · created Aug 30, 2017 by Venkat Malladi rejected
- CLOSED
- 1
- 1
updated Apr 16, 2020
Config Lock git

#81 · created Mar 30, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 16, 2020
Gitlab CI overridding concurrent pipelines

#80 · created Mar 28, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
- 5
updated Apr 16, 2020
Fix sigbus error

#79 · created Mar 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 2
updated Apr 16, 2020
Disk quota exceeded

#82 · created Mar 31, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 13, 2020
Single Rep Pool and Pseudo

#73 · created Jan 07, 2020 by Venkat Malladi 1.1.1 Test bug
- CLOSED
- 1
- 0
updated Mar 24, 2020
Update to Astrocyte 0.2.0

#77 · created Mar 15, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Mar 21, 2020
hg37 annotate peaks fails

#71 · created Jan 02, 2020 by Holly Ruess 1.1.0 To Do rejected
- CLOSED
- 1
updated Mar 20, 2020
annotate peaks

#47 · created May 13, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 20, 2020
Move to use Process scripts

#17 · created May 08, 2018 by Venkat Malladi enhancement rejected
- CLOSED
- 1
updated Mar 20, 2020
callPeaksMACS exits when data is bad

#26 · created Jan 15, 2019 by Holly Ruess 1.1.0 bug
- CLOSED
- 1
- 3
updated Mar 15, 2020
add plotProfile

#29 · created Jan 23, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
xcor.py, --random-source fails if file is too small

#30 · created Feb 12, 2019 by Holly Ruess 1.1.0
- CLOSED
- 1
- 0
updated Mar 15, 2020
Single control or experiment fails at call peaks macs

#58 · created Jul 02, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
Testing fails on new update

#65 · created Sep 16, 2019 by Venkat Malladi 1.1.0 bug
- CLOSED
- 2
- 0
updated Mar 15, 2020