Issues · BICF / Astrocyte / chipseq_analysis

New issue

Add defined output folder

#22 · created Dec 26, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 0
updated Jan 06, 2019
Add in blacklist

#9 · created Oct 11, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add in current chip-analysis functionality.

#15 · created Nov 20, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 2
- 1
updated Jan 11, 2019
Add in Macs2 support

#7 · created Oct 11, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Nov 20, 2017
Add in merge request template

#51 · created May 15, 2019 by Venkat Malladi enhancement
- CLOSED
- 1
- 0
updated May 15, 2019
Add in peak call with SPP and IDR

#14 · created Nov 14, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add license

#53 · created May 16, 2019 by Venkat Malladi documentation enhancement
- CLOSED
- 1
- 0
updated May 17, 2019
Add mapping and trimming

#3 · created Sep 30, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 11, 2017
Add multiqc summary of data

#19 · created Aug 11, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 2
updated Apr 21, 2019
add plotProfile

#29 · created Jan 23, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
Annotate Diffbind output

#63 · created Aug 25, 2019 by Holly Ruess 2.0.0 To Do enhancement
- 0
updated Dec 29, 2020
annotate peaks

#47 · created May 13, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 20, 2020
Annotepeaks

#74 · created Feb 03, 2020 by Venkat Malladi 2.0.0 Doing enhancement
- 1
updated Jun 23, 2020
Bam Stats and Filter

#4 · created Oct 09, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 11, 2017
Change Tests for Peak comparison to be greater than or equal to

#50 · created May 14, 2019 by Venkat Malladi 1.0.4 enhancement
- CLOSED
- 1
- 0
updated May 15, 2019
Fail Pipeline if less reads map to genome

#55 · created May 20, 2019 by Jeremy Mathews 1.0.6 enhancement
- CLOSED
- 3
- 2
updated Jul 10, 2019
Fix Astrocyte links

#46 · created May 10, 2019 by Holly Ruess 1.0.4 enhancement
- CLOSED
- 1
- 1
updated May 15, 2019
Include Phantompeakqualtools step

#5 · created Oct 11, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 1
updated Oct 24, 2017
Make both astrocyte compatable and other cluster compatable

#60 · created Jul 10, 2019 by Holly Ruess 3.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Make tagAlign files

#12 · created Oct 18, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 23, 2017