From fbec87383b793f57717e23b77424a82222b09e47 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sun, 6 Jan 2019 21:03:33 -0600
Subject: [PATCH] Shorten and update file names.
---
workflow/scripts/pool_and_psuedoreplicate.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/scripts/pool_and_psuedoreplicate.py b/workflow/scripts/pool_and_psuedoreplicate.py
index c267037..61864a4 100644
--- a/workflow/scripts/pool_and_psuedoreplicate.py
+++ b/workflow/scripts/pool_and_psuedoreplicate.py
@@ -273,7 +273,7 @@ def main():
pool_pseudoreplicates_dict = {}
for index, row in pseudoreplicates_df.iterrows():
replicate_id = index + 1
- pr_filename = experiment_id + ".pr" + str(replicate_id) + '.bedse.gz'
+ pr_filename = experiment_id + ".pr" + str(replicate_id) + '.tagAlign.gz'
pool_replicate = pool(row, pr_filename, False)
pool_pseudoreplicates_dict[replicate_id] = pool_replicate
--
GitLab