diff --git a/astrocyte_pkg.yml b/astrocyte_pkg.yml index 32659255ab6fc81c2b7bd527eb5ccfcba1f531dd..fb2cd5eb47c4383338a9c307260472386b5028fc 100644 --- a/astrocyte_pkg.yml +++ b/astrocyte_pkg.yml @@ -82,17 +82,11 @@ workflow_parameters: description: | Bam files of all samples - - id: bais - type: files - required: true - description: | - Bam index files of all samples - - id: peaks type: files required: true description: | - Peak files of all samples. Bed format + Peak files of all samples. Peaks should be sorted. Bed format - id: design type: files @@ -105,9 +99,9 @@ workflow_parameters: - id: genomepath type: select choices: - - [ '/project/shared/bicf_workflow_ref/GRCh38', 'hg38'] - - [ '/project/shared/bicf_workflow_ref/GRCh37', 'hg19'] - - [ '/project/shared/bicf_workflow_ref/GRCm38', 'mm10'] + - [ '/project/shared/bicf_workflow_ref/GRCh38', 'human GRCh38'] + - [ '/project/shared/bicf_workflow_ref/GRCh37', 'human GRCh37'] + - [ '/project/shared/bicf_workflow_ref/GRCm38', 'mouse GRCm38'] required: true description: | Reference genome for annotation