From f3de8565c6141f9466fe61e91bc5651bd35201a9 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Wed, 17 Apr 2019 17:45:44 -0500
Subject: [PATCH] Fix software outout.
---
workflow/main.nf | 22 +++++++++++-----------
1 file changed, 11 insertions(+), 11 deletions(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index 841516a..531ec7e 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -491,17 +491,17 @@ process softwareReport {
input:
- file trimReads_vf from trimReadsVersions.distinct().collect()
- file alignReads_vf from alignReadsVersions.distinct().collect()
- file filterReads_vf from filterReadsVersions.distinct().collect()
- file convertReads_vf from convertReadsVersions.distinct().collect()
- file crossReads_vf from crossReadsVersions.distinct().collect()
- file callPeaksMACS_vf from callPeaksMACSVersions.distinct().collect()
- file consensusPeaks_vf from consensusPeaksVersions.distinct().collect()
- file peakAnnotation_vf from peakAnnotationVersions.distinct().collect()
- file motifSearch_vf from motifSearchVersions.distinct().collect().ifEmpty()
- file diffPeaks_vf from diffPeaksVersions.distinct().collect().ifEmpty()
- file experimentQC_vf from experimentQCVersions.distinct().collect()
+ file ('trimReads_vf/*') from trimReadsVersions.first()
+ file ('alignReads_vf/*') from alignReadsVersions.first()
+ file ('filterReads_vf/*') from filterReadsVersions.first()
+ file ('convertReads_vf/*') from convertReadsVersions.first()
+ file ('crossReads_vf/*') from crossReadsVersions.first()
+ file ('callPeaksMACS_vf/*') from callPeaksMACSVersions.first()
+ file ('consensusPeaks_vf/*') from consensusPeaksVersions.first()
+ file ('peakAnnotation_vf/*') from peakAnnotationVersions.first()
+ file ('motifSearch_vf/*') from motifSearchVersions.first().ifEmpty()
+ file ('diffPeaks_vf/*') from diffPeaksVersions.first().ifEmpty()
+ file ('experimentQC_vf/*') from experimentQCVersions.first()
output:
--
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