diff --git a/workflow/main.nf b/workflow/main.nf index 841516a38fabe1e6a4d8642ef3a1ba8376a8f9db..531ec7eeb3c305cd626e8c0d4266592c98b07206 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -491,17 +491,17 @@ process softwareReport { input: - file trimReads_vf from trimReadsVersions.distinct().collect() - file alignReads_vf from alignReadsVersions.distinct().collect() - file filterReads_vf from filterReadsVersions.distinct().collect() - file convertReads_vf from convertReadsVersions.distinct().collect() - file crossReads_vf from crossReadsVersions.distinct().collect() - file callPeaksMACS_vf from callPeaksMACSVersions.distinct().collect() - file consensusPeaks_vf from consensusPeaksVersions.distinct().collect() - file peakAnnotation_vf from peakAnnotationVersions.distinct().collect() - file motifSearch_vf from motifSearchVersions.distinct().collect().ifEmpty() - file diffPeaks_vf from diffPeaksVersions.distinct().collect().ifEmpty() - file experimentQC_vf from experimentQCVersions.distinct().collect() + file ('trimReads_vf/*') from trimReadsVersions.first() + file ('alignReads_vf/*') from alignReadsVersions.first() + file ('filterReads_vf/*') from filterReadsVersions.first() + file ('convertReads_vf/*') from convertReadsVersions.first() + file ('crossReads_vf/*') from crossReadsVersions.first() + file ('callPeaksMACS_vf/*') from callPeaksMACSVersions.first() + file ('consensusPeaks_vf/*') from consensusPeaksVersions.first() + file ('peakAnnotation_vf/*') from peakAnnotationVersions.first() + file ('motifSearch_vf/*') from motifSearchVersions.first().ifEmpty() + file ('diffPeaks_vf/*') from diffPeaksVersions.first().ifEmpty() + file ('experimentQC_vf/*') from experimentQCVersions.first() output: